PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc07578.1.g00030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 216aa    MW: 24036.6 Da    PI: 9.7746
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc07578.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.35.8e-131667155
                                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                  ++++h ++Er+RR+++N+ +  Lr+l P +   + k+ + a+i   A+++I++Lq
  Zmw_sc07578.1.g00030.1.am.mk 16 KKMSHIAVERNRRRQMNEHLKVLRSLTPAL---YIKRGDQASIIGGAIDFIRELQ 67
                                  689***************************...9********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.42E-121371No hitNo description
Gene3DG3DSA:4.10.280.101.6E-141369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-171593IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.6051566IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.5E-101667IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.9E-122172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009913Biological Processepidermal cell differentiation
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
GSSSGRCLHT GRRRRKKMSH IAVERNRRRQ MNEHLKVLRS LTPALYIKRG DQASIIGGAI  60
DFIRELQQVL ESLEARKKRR RSSSSFSTSP TPSPRSLLTT ASSSSPTKHH QVELAACCNS  120
PVADVEAKIS GSNVLLRTLS RRIPGHAVRM IAVLENLHLD VLHLNISTMD DTIGLECQLS  180
VDDLVYEVQQ TFACCHQAEL LEHQDSLMLH PSAMAI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004968634.11e-86PREDICTED: transcription factor MUTE
SwissprotQ9M8K62e-66MUTE_ARATH; Transcription factor MUTE
TrEMBLK3XR971e-84K3XR97_SETIT; Uncharacterized protein
STRINGSi004438m3e-84(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP111443441